Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PDE6GP18545 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.24□□□□□ -0.77
PDE6GP18545 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PDE6GP18545 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PDE6GP18545 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PDE6GP18545 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PDE6GP18545 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
PDE6GP18545 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 AC087481.3-201ENST00000602886 1894 ntBASIC10.23□□□□□ -0.77
PDE6GP18545 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 AC104581.4-201ENST00000623126 3052 ntBASIC10.23□□□□□ -0.77
PDE6GP18545 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 SLC29A4P1-201ENST00000398760 971 ntBASIC10.23□□□□□ -0.77
PDE6GP18545 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 DDT-203ENST00000403754 569 ntTSL 3 BASIC10.23□□□□□ -0.77
PDE6GP18545 KRASP1-201ENST00000407852 552 ntBASIC10.23□□□□□ -0.77
PDE6GP18545 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 DDT-206ENST00000430101 573 ntTSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
PDE6GP18545 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC10.23□□□□□ -0.77
PDE6GP18545 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 AC013467.2-201ENST00000605472 835 ntBASIC10.23□□□□□ -0.77
PDE6GP18545 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
PDE6GP18545 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC10.23□□□□□ -0.77
PDE6GP18545 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PDE6GP18545 FP325330.2-201ENST00000624219 5630 ntBASIC10.22□□□□□ -0.77
PDE6GP18545 AC232323.1-201ENST00000540724 2099 ntBASIC10.22□□□□□ -0.77
PDE6GP18545 REXO1L5P-201ENST00000622260 2098 ntBASIC10.22□□□□□ -0.77
PDE6GP18545 AC004817.3-201ENST00000602957 2129 ntBASIC10.22□□□□□ -0.77
PDE6GP18545 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.22□□□□□ -0.77
PDE6GP18545 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
PDE6GP18545 CSPG4P11-201ENST00000560634 4910 ntBASIC10.22□□□□□ -0.77
PDE6GP18545 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PDE6GP18545 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PDE6GP18545 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC10.22□□□□□ -0.77
PDE6GP18545 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PDE6GP18545 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC10.22□□□□□ -0.77
PDE6GP18545 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
PDE6GP18545 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC10.22□□□□□ -0.77
PDE6GP18545 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
PDE6GP18545 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PDE6GP18545 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC10.22□□□□□ -0.77
PDE6GP18545 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
PDE6GP18545 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
PDE6GP18545 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
PDE6GP18545 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
PDE6GP18545 SNX18-202ENST00000343017 3140 ntBASIC10.22□□□□□ -0.77
PDE6GP18545 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms