Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BRAFP15056 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BRAFP15056 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.06■□□□□ 0.32
BRAFP15056 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BRAFP15056 STK19B-204ENST00000512515 211 ntBASIC17.06■□□□□ 0.32
BRAFP15056 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.06■□□□□ 0.32
BRAFP15056 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.06■□□□□ 0.32
BRAFP15056 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.06■□□□□ 0.32
BRAFP15056 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.06■□□□□ 0.32
BRAFP15056 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BRAFP15056 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BRAFP15056 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.06■□□□□ 0.32
BRAFP15056 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
BRAFP15056 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
BRAFP15056 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRAFP15056 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 AC144831.1-201ENST00000573312 2656 ntBASIC17.05■□□□□ 0.32
BRAFP15056 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BRAFP15056 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BRAFP15056 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
BRAFP15056 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.05■□□□□ 0.32
BRAFP15056 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.05■□□□□ 0.32
BRAFP15056 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
BRAFP15056 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.05■□□□□ 0.32
BRAFP15056 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.05■□□□□ 0.32
BRAFP15056 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.05■□□□□ 0.32
BRAFP15056 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.05■□□□□ 0.32
BRAFP15056 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
BRAFP15056 BX640515.1-201ENST00000617215 977 ntBASIC17.05■□□□□ 0.32
BRAFP15056 AC116407.3-201ENST00000623905 1129 ntBASIC17.05■□□□□ 0.32
BRAFP15056 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.05■□□□□ 0.32
BRAFP15056 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.05■□□□□ 0.32
BRAFP15056 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
BRAFP15056 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
BRAFP15056 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
BRAFP15056 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRAFP15056 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
BRAFP15056 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRAFP15056 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.04■□□□□ 0.32
BRAFP15056 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRAFP15056 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRAFP15056 AL596087.1-201ENST00000400979 1969 ntBASIC17.04■□□□□ 0.32
BRAFP15056 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BRAFP15056 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRAFP15056 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRAFP15056 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BRAFP15056 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms