Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TARDBPP1-201ENST00000442013 1203 ntBASIC18.47■□□□□ 0.55
COL11A1P12107 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 AC010319.3-201ENST00000597028 470 ntBASIC18.47■□□□□ 0.55
COL11A1P12107 MIR6752-201ENST00000618442 71 ntBASIC18.47■□□□□ 0.55
COL11A1P12107 RPSAP52-203ENST00000622976 1023 ntBASIC18.47■□□□□ 0.55
COL11A1P12107 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL11A1P12107 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.47■□□□□ 0.55
COL11A1P12107 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.47■□□□□ 0.55
COL11A1P12107 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.47■□□□□ 0.55
COL11A1P12107 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
COL11A1P12107 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL11A1P12107 KRT8P37-201ENST00000451609 1420 ntBASIC18.47■□□□□ 0.55
COL11A1P12107 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.46■□□□□ 0.55
COL11A1P12107 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 SDHAP3-202ENST00000515467 728 ntBASIC18.46■□□□□ 0.55
COL11A1P12107 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
COL11A1P12107 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.46■□□□□ 0.55
COL11A1P12107 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.46■□□□□ 0.55
COL11A1P12107 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.46■□□□□ 0.55
COL11A1P12107 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
COL11A1P12107 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 AC005052.1-201ENST00000625181 2492 ntBASIC18.46■□□□□ 0.55
COL11A1P12107 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.46■□□□□ 0.55
COL11A1P12107 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
COL11A1P12107 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.46■□□□□ 0.55
COL11A1P12107 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.46■□□□□ 0.55
COL11A1P12107 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.46■□□□□ 0.55
COL11A1P12107 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.46■□□□□ 0.55
COL11A1P12107 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.46■□□□□ 0.55
COL11A1P12107 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.46■□□□□ 0.55
COL11A1P12107 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
COL11A1P12107 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL11A1P12107 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.54
COL11A1P12107 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL11A1P12107 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 AC098614.1-201ENST00000368528 745 ntBASIC18.45■□□□□ 0.54
COL11A1P12107 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.45■□□□□ 0.54
COL11A1P12107 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COL11A1P12107 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.45■□□□□ 0.54
COL11A1P12107 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.45■□□□□ 0.54
COL11A1P12107 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL11A1P12107 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL11A1P12107 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
COL11A1P12107 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.45■□□□□ 0.54
COL11A1P12107 REXO1L8P-201ENST00000604378 1897 ntBASIC18.45■□□□□ 0.54
COL11A1P12107 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.45■□□□□ 0.54
COL11A1P12107 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL11A1P12107 AC009053.2-201ENST00000563701 2365 ntBASIC18.45■□□□□ 0.54
COL11A1P12107 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COL11A1P12107 HLA-V-201ENST00000429037 534 ntBASIC18.44■□□□□ 0.54
COL11A1P12107 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL11A1P12107 MYCLP2-201ENST00000449268 967 ntBASIC18.44■□□□□ 0.54
COL11A1P12107 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL11A1P12107 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
COL11A1P12107 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
COL11A1P12107 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.44■□□□□ 0.54
COL11A1P12107 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL11A1P12107 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
COL11A1P12107 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
COL11A1P12107 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL11A1P12107 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL11A1P12107 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.44■□□□□ 0.54
COL11A1P12107 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms