Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 AL512638.1-201ENST00000457493 794 ntBASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 AP3S2-216ENST00000617003 1561 ntBASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40ALP0C0E4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 KRT8P39-201ENST00000396270 1433 ntBASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 FAM207CP-201ENST00000443486 507 ntBASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 TSPY16P-201ENST00000449843 468 ntBASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 AP002490.2-201ENST00000524791 560 ntBASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 AC007967.4-201ENST00000614700 386 ntBASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 AL390754.1-201ENST00000619088 582 ntBASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40ALP0C0E4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 HLA-H-201ENST00000383620 1096 ntBASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 AC190387.1-201ENST00000551683 408 ntBASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms