Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CXCL1P09341 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CXCL1P09341 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.86□□□□□ -0.35
CXCL1P09341 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CXCL1P09341 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CXCL1P09341 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.86□□□□□ -0.35
CXCL1P09341 TSPY12P-201ENST00000421279 868 ntBASIC12.86□□□□□ -0.35
CXCL1P09341 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.86□□□□□ -0.35
CXCL1P09341 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.86□□□□□ -0.35
CXCL1P09341 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.86□□□□□ -0.35
CXCL1P09341 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.86□□□□□ -0.35
CXCL1P09341 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CXCL1P09341 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.86□□□□□ -0.35
CXCL1P09341 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 AP000525.1-201ENST00000608286 694 ntBASIC12.86□□□□□ -0.35
CXCL1P09341 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.86□□□□□ -0.35
CXCL1P09341 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 AL390755.1-201ENST00000623716 2027 ntBASIC12.86□□□□□ -0.35
CXCL1P09341 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.86□□□□□ -0.35
CXCL1P09341 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CXCL1P09341 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 AC009090.5-201ENST00000624886 2285 ntBASIC12.85□□□□□ -0.35
CXCL1P09341 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCL1P09341 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.85□□□□□ -0.35
CXCL1P09341 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
CXCL1P09341 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 HMGA1P5-201ENST00000412453 271 ntBASIC12.85□□□□□ -0.35
CXCL1P09341 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCL1P09341 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CXCL1P09341 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.85□□□□□ -0.35
CXCL1P09341 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CXCL1P09341 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 TMBIM7P-203ENST00000641617 1718 ntBASIC12.85□□□□□ -0.35
CXCL1P09341 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CXCL1P09341 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CXCL1P09341 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.85□□□□□ -0.35
CXCL1P09341 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.84□□□□□ -0.35
CXCL1P09341 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCL1P09341 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCL1P09341 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCL1P09341 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CXCL1P09341 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms