Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 TSPY19P-201ENST00000418461 509 ntBASIC14.93□□□□□ -0.02
HLA-DPB1P04440 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 TSPY18P-201ENST00000441642 509 ntBASIC14.93□□□□□ -0.02
HLA-DPB1P04440 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 AD001527.2-201ENST00000622994 785 ntBASIC14.93□□□□□ -0.02
HLA-DPB1P04440 AC073592.5-201ENST00000624854 528 ntBASIC14.93□□□□□ -0.02
HLA-DPB1P04440 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 AC144831.1-201ENST00000573312 2656 ntBASIC14.93□□□□□ -0.02
HLA-DPB1P04440 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 AC022532.1-201ENST00000624563 1728 ntBASIC14.92□□□□□ -0.02
HLA-DPB1P04440 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 AC132938.5-201ENST00000624980 1813 ntBASIC14.92□□□□□ -0.02
HLA-DPB1P04440 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 AC003669.1-201ENST00000334569 611 ntBASIC14.92□□□□□ -0.02
HLA-DPB1P04440 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.92□□□□□ -0.02
HLA-DPB1P04440 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPB1P04440 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 AC010491.1-201ENST00000563101 2797 ntBASIC14.91□□□□□ -0.02
HLA-DPB1P04440 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 ABCD1P5-201ENST00000445663 754 ntBASIC14.91□□□□□ -0.02
HLA-DPB1P04440 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms