Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD74P04233 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD74P04233 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.92□□□□□ -0.18
CD74P04233 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.92□□□□□ -0.18
CD74P04233 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CD74P04233 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.92□□□□□ -0.18
CD74P04233 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.92□□□□□ -0.18
CD74P04233 VENTXP7-201ENST00000475503 772 ntBASIC13.92□□□□□ -0.18
CD74P04233 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.92□□□□□ -0.18
CD74P04233 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.92□□□□□ -0.18
CD74P04233 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD74P04233 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.92□□□□□ -0.18
CD74P04233 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.92□□□□□ -0.18
CD74P04233 AC073592.4-201ENST00000623827 446 ntBASIC13.92□□□□□ -0.18
CD74P04233 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.92□□□□□ -0.18
CD74P04233 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD74P04233 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD74P04233 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.92□□□□□ -0.18
CD74P04233 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.91□□□□□ -0.18
CD74P04233 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.91□□□□□ -0.18
CD74P04233 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CD74P04233 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.91□□□□□ -0.18
CD74P04233 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CD74P04233 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.91□□□□□ -0.18
CD74P04233 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.91□□□□□ -0.18
CD74P04233 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD74P04233 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CD74P04233 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CD74P04233 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CD74P04233 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CD74P04233 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.91□□□□□ -0.18
CD74P04233 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CD74P04233 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CD74P04233 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.91□□□□□ -0.18
CD74P04233 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD74P04233 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 AL592424.1-201ENST00000563624 1536 ntBASIC13.9□□□□□ -0.18
CD74P04233 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CD74P04233 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CD74P04233 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CD74P04233 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD74P04233 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.9□□□□□ -0.18
CD74P04233 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.9□□□□□ -0.18
CD74P04233 AC091167.2-201ENST00000579581 588 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms