Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 AP002414.1-201ENST00000391405 1147 ntBASIC16.91■□□□□ 0.3
MT-ND3P03897 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 AL020989.1-201ENST00000422979 469 ntBASIC16.91■□□□□ 0.3
MT-ND3P03897 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.91■□□□□ 0.3
MT-ND3P03897 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.91■□□□□ 0.3
MT-ND3P03897 AC139887.3-201ENST00000568585 713 ntBASIC16.91■□□□□ 0.3
MT-ND3P03897 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.91■□□□□ 0.3
MT-ND3P03897 GPALPP1-207ENST00000611650 899 ntBASIC16.91■□□□□ 0.3
MT-ND3P03897 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
MT-ND3P03897 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.91■□□□□ 0.3
MT-ND3P03897 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.91■□□□□ 0.3
MT-ND3P03897 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 AC148477.5-201ENST00000625164 1645 ntBASIC16.91■□□□□ 0.3
MT-ND3P03897 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.91■□□□□ 0.3
MT-ND3P03897 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MT-ND3P03897 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.91■□□□□ 0.3
MT-ND3P03897 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
MT-ND3P03897 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
MT-ND3P03897 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 AL596087.1-201ENST00000400979 1969 ntBASIC16.9■□□□□ 0.3
MT-ND3P03897 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 AC006277.1-201ENST00000624348 1610 ntBASIC16.9■□□□□ 0.3
MT-ND3P03897 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.9■□□□□ 0.3
MT-ND3P03897 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.9■□□□□ 0.3
MT-ND3P03897 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 AL139288.1-201ENST00000623748 933 ntBASIC16.9■□□□□ 0.3
MT-ND3P03897 AC148477.8-201ENST00000624298 468 ntBASIC16.9■□□□□ 0.3
MT-ND3P03897 AL139011.1-202ENST00000642063 584 ntBASIC16.9■□□□□ 0.3
MT-ND3P03897 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MT-ND3P03897 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.9■□□□□ 0.3
MT-ND3P03897 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.9■□□□□ 0.3
MT-ND3P03897 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.9■□□□□ 0.3
MT-ND3P03897 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MT-ND3P03897 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.9■□□□□ 0.3
MT-ND3P03897 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.89■□□□□ 0.3
MT-ND3P03897 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MT-ND3P03897 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MT-ND3P03897 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MT-ND3P03897 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MT-ND3P03897 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.89■□□□□ 0.29
MT-ND3P03897 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MT-ND3P03897 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MT-ND3P03897 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
MT-ND3P03897 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.89■□□□□ 0.29
MT-ND3P03897 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 KRT18P58-201ENST00000527480 1120 ntBASIC16.89■□□□□ 0.29
MT-ND3P03897 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.89■□□□□ 0.29
MT-ND3P03897 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.89■□□□□ 0.29
MT-ND3P03897 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
MT-ND3P03897 AC013467.2-201ENST00000605472 835 ntBASIC16.89■□□□□ 0.29
MT-ND3P03897 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.89■□□□□ 0.29
MT-ND3P03897 AL356309.3-201ENST00000624132 1934 ntBASIC16.89■□□□□ 0.29
MT-ND3P03897 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.89■□□□□ 0.29
MT-ND3P03897 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.89■□□□□ 0.29
MT-ND3P03897 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.89■□□□□ 0.29
MT-ND3P03897 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms