Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPTA1P02549 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SPTA1P02549 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SPTA1P02549 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPTA1P02549 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPTA1P02549 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
SPTA1P02549 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPTA1P02549 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPTA1P02549 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.89□□□□□ -0.03
SPTA1P02549 KRT8P13-201ENST00000463294 1010 ntBASIC14.89□□□□□ -0.03
SPTA1P02549 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.89□□□□□ -0.03
SPTA1P02549 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 AC243960.2-201ENST00000600996 747 ntBASIC14.89□□□□□ -0.03
SPTA1P02549 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPTA1P02549 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SPTA1P02549 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SPTA1P02549 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.89□□□□□ -0.03
SPTA1P02549 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPTA1P02549 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.89□□□□□ -0.03
SPTA1P02549 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SPTA1P02549 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.88□□□□□ -0.03
SPTA1P02549 MIR1247-201ENST00000408206 136 ntBASIC14.88□□□□□ -0.03
SPTA1P02549 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.88□□□□□ -0.03
SPTA1P02549 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.88□□□□□ -0.03
SPTA1P02549 AC079328.1-201ENST00000560358 952 ntBASIC14.88□□□□□ -0.03
SPTA1P02549 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.88□□□□□ -0.03
SPTA1P02549 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.88□□□□□ -0.03
SPTA1P02549 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.88□□□□□ -0.03
SPTA1P02549 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.88□□□□□ -0.03
SPTA1P02549 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.88□□□□□ -0.03
SPTA1P02549 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.88□□□□□ -0.03
SPTA1P02549 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SPTA1P02549 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.88□□□□□ -0.03
SPTA1P02549 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 AC099336.1-201ENST00000417053 1171 ntBASIC14.88□□□□□ -0.03
SPTA1P02549 FAM21FP-201ENST00000426241 1131 ntBASIC14.88□□□□□ -0.03
SPTA1P02549 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.88□□□□□ -0.03
SPTA1P02549 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SPTA1P02549 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.88□□□□□ -0.03
SPTA1P02549 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPTA1P02549 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 GPAA1P2-201ENST00000417923 928 ntBASIC14.87□□□□□ -0.03
SPTA1P02549 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.87□□□□□ -0.03
SPTA1P02549 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SPTA1P02549 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.87□□□□□ -0.03
SPTA1P02549 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.87□□□□□ -0.03
SPTA1P02549 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.87□□□□□ -0.03
SPTA1P02549 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.87□□□□□ -0.03
SPTA1P02549 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SPTA1P02549 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.87□□□□□ -0.03
SPTA1P02549 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SPTA1P02549 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms