Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.81□□□□□ -0.04
CDRT1O95170 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.81□□□□□ -0.04
CDRT1O95170 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.81□□□□□ -0.04
CDRT1O95170 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.81□□□□□ -0.04
CDRT1O95170 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.81□□□□□ -0.04
CDRT1O95170 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.81□□□□□ -0.04
CDRT1O95170 FAM45BP-202ENST00000592932 1624 ntBASIC14.81□□□□□ -0.04
CDRT1O95170 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CDRT1O95170 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.81□□□□□ -0.04
CDRT1O95170 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDRT1O95170 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 AL009178.2-201ENST00000597278 2719 ntBASIC14.8□□□□□ -0.04
CDRT1O95170 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.8□□□□□ -0.04
CDRT1O95170 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.8□□□□□ -0.04
CDRT1O95170 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.8□□□□□ -0.04
CDRT1O95170 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CDRT1O95170 RN7SL606P-201ENST00000472779 293 ntBASIC14.8□□□□□ -0.04
CDRT1O95170 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.8□□□□□ -0.04
CDRT1O95170 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.8□□□□□ -0.04
CDRT1O95170 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.8□□□□□ -0.04
CDRT1O95170 AC005336.2-201ENST00000593183 939 ntBASIC14.8□□□□□ -0.04
CDRT1O95170 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.8□□□□□ -0.04
CDRT1O95170 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.8□□□□□ -0.04
CDRT1O95170 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDRT1O95170 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDRT1O95170 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CDRT1O95170 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CDRT1O95170 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.79□□□□□ -0.04
CDRT1O95170 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT1O95170 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT1O95170 AL845331.1-201ENST00000424978 1190 ntBASIC14.79□□□□□ -0.04
CDRT1O95170 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT1O95170 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
CDRT1O95170 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.79□□□□□ -0.04
CDRT1O95170 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.79□□□□□ -0.04
CDRT1O95170 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT1O95170 AC011840.4-201ENST00000578471 627 ntBASIC14.79□□□□□ -0.04
CDRT1O95170 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 AL138831.2-201ENST00000606564 490 ntBASIC14.79□□□□□ -0.04
CDRT1O95170 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT1O95170 IGHV3-41-201ENST00000613121 348 ntBASIC14.79□□□□□ -0.04
CDRT1O95170 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.79□□□□□ -0.04
CDRT1O95170 AC023157.3-201ENST00000619086 2088 ntBASIC14.79□□□□□ -0.04
CDRT1O95170 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.79□□□□□ -0.04
CDRT1O95170 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT1O95170 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT1O95170 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT1O95170 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT1O95170 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms