Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE3O75131 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE3O75131 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
CPNE3O75131 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CPNE3O75131 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CPNE3O75131 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE3O75131 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 MIR770-201ENST00000390219 98 ntBASIC15.91■□□□□ 0.14
CPNE3O75131 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE3O75131 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE3O75131 PMS2P4-201ENST00000412466 1052 ntBASIC15.91■□□□□ 0.14
CPNE3O75131 AC092474.2-201ENST00000424288 719 ntBASIC15.91■□□□□ 0.14
CPNE3O75131 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.91■□□□□ 0.14
CPNE3O75131 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE3O75131 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE3O75131 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.91■□□□□ 0.14
CPNE3O75131 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.91■□□□□ 0.14
CPNE3O75131 AC011467.4-201ENST00000594891 528 ntBASIC15.91■□□□□ 0.14
CPNE3O75131 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE3O75131 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 WASH6P-202ENST00000359512 1437 ntBASIC15.91■□□□□ 0.14
CPNE3O75131 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE3O75131 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 CROCCP2-202ENST00000412962 2773 ntBASIC15.91■□□□□ 0.14
CPNE3O75131 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE3O75131 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE3O75131 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CPNE3O75131 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CPNE3O75131 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE3O75131 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.9■□□□□ 0.14
CPNE3O75131 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.9■□□□□ 0.14
CPNE3O75131 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.9■□□□□ 0.14
CPNE3O75131 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE3O75131 AC069335.1-201ENST00000489972 472 ntBASIC15.9■□□□□ 0.14
CPNE3O75131 AC067863.1-201ENST00000494933 530 ntBASIC15.9■□□□□ 0.14
CPNE3O75131 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE3O75131 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE3O75131 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.9■□□□□ 0.14
CPNE3O75131 KRT8P23-201ENST00000560090 1207 ntBASIC15.9■□□□□ 0.14
CPNE3O75131 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.9■□□□□ 0.14
CPNE3O75131 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CPNE3O75131 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CPNE3O75131 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE3O75131 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE3O75131 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE3O75131 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE3O75131 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE3O75131 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE3O75131 PCDHA1-201ENST00000378133 2726 ntBASIC15.89■□□□□ 0.13
CPNE3O75131 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CPNE3O75131 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.89■□□□□ 0.13
CPNE3O75131 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CPNE3O75131 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE3O75131 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CPNE3O75131 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CPNE3O75131 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CPNE3O75131 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CPNE3O75131 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE3O75131 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE3O75131 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE3O75131 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE3O75131 AC092850.2-201ENST00000623821 2697 ntBASIC15.89■□□□□ 0.13
CPNE3O75131 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.89■□□□□ 0.13
CPNE3O75131 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.89■□□□□ 0.13
CPNE3O75131 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE3O75131 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE3O75131 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.89■□□□□ 0.13
CPNE3O75131 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.89■□□□□ 0.13
CPNE3O75131 SPCS2P4-201ENST00000436160 681 ntBASIC15.89■□□□□ 0.13
CPNE3O75131 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE3O75131 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.89■□□□□ 0.13
CPNE3O75131 AC015911.4-201ENST00000588022 1070 ntBASIC15.89■□□□□ 0.13
CPNE3O75131 AC093512.1-201ENST00000617969 520 ntBASIC15.89■□□□□ 0.13
CPNE3O75131 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.89■□□□□ 0.13
CPNE3O75131 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE3O75131 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms