Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 RNF152P1-201ENST00000397754 604 ntBASIC16.29■□□□□ 0.2
EDF1O60869 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.29■□□□□ 0.2
EDF1O60869 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.29■□□□□ 0.2
EDF1O60869 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.29■□□□□ 0.2
EDF1O60869 AP005901.3-202ENST00000581653 237 ntBASIC16.29■□□□□ 0.2
EDF1O60869 AL353135.1-201ENST00000606729 504 ntBASIC16.29■□□□□ 0.2
EDF1O60869 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.29■□□□□ 0.2
EDF1O60869 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.29■□□□□ 0.2
EDF1O60869 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
EDF1O60869 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 CICP24-201ENST00000605464 2705 ntBASIC16.29■□□□□ 0.2
EDF1O60869 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EDF1O60869 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
EDF1O60869 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.28■□□□□ 0.2
EDF1O60869 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.28■□□□□ 0.2
EDF1O60869 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.28■□□□□ 0.2
EDF1O60869 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.28■□□□□ 0.2
EDF1O60869 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.28■□□□□ 0.2
EDF1O60869 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.28■□□□□ 0.2
EDF1O60869 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.28■□□□□ 0.2
EDF1O60869 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.28■□□□□ 0.2
EDF1O60869 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
EDF1O60869 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.28■□□□□ 0.2
EDF1O60869 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EDF1O60869 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.27■□□□□ 0.2
EDF1O60869 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
EDF1O60869 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EDF1O60869 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EDF1O60869 AC138035.3-201ENST00000622706 2791 ntBASIC16.27■□□□□ 0.2
EDF1O60869 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
EDF1O60869 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
EDF1O60869 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
EDF1O60869 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EDF1O60869 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.27■□□□□ 0.2
EDF1O60869 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EDF1O60869 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EDF1O60869 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EDF1O60869 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.27■□□□□ 0.2
EDF1O60869 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EDF1O60869 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.27■□□□□ 0.2
EDF1O60869 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.27■□□□□ 0.2
EDF1O60869 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.27■□□□□ 0.2
EDF1O60869 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.27■□□□□ 0.2
EDF1O60869 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.27■□□□□ 0.2
EDF1O60869 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.27■□□□□ 0.2
EDF1O60869 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.27■□□□□ 0.2
EDF1O60869 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
EDF1O60869 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
EDF1O60869 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
EDF1O60869 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
EDF1O60869 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.27■□□□□ 0.19
EDF1O60869 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
EDF1O60869 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.27■□□□□ 0.19
EDF1O60869 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
EDF1O60869 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms