Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCA5O60264 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SMARCA5O60264 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SMARCA5O60264 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SMARCA5O60264 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SMARCA5O60264 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.36■□□□□ 0.85
SMARCA5O60264 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 MCCD1P2-201ENST00000423228 335 ntBASIC20.36■□□□□ 0.85
SMARCA5O60264 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.36■□□□□ 0.85
SMARCA5O60264 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.36■□□□□ 0.85
SMARCA5O60264 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.36■□□□□ 0.85
SMARCA5O60264 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.36■□□□□ 0.85
SMARCA5O60264 AL138918.1-201ENST00000568306 659 ntBASIC20.36■□□□□ 0.85
SMARCA5O60264 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.36■□□□□ 0.85
SMARCA5O60264 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.36■□□□□ 0.85
SMARCA5O60264 OR6D1P-203ENST00000641209 4860 ntBASIC20.36■□□□□ 0.85
SMARCA5O60264 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.36■□□□□ 0.85
SMARCA5O60264 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SMARCA5O60264 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCA5O60264 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.35■□□□□ 0.85
SMARCA5O60264 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.35■□□□□ 0.85
SMARCA5O60264 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 YBX2P1-201ENST00000394192 760 ntBASIC20.35■□□□□ 0.85
SMARCA5O60264 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.35■□□□□ 0.85
SMARCA5O60264 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SMARCA5O60264 AC002347.1-201ENST00000569543 541 ntBASIC20.35■□□□□ 0.85
SMARCA5O60264 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.35■□□□□ 0.85
SMARCA5O60264 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.35■□□□□ 0.85
SMARCA5O60264 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
SMARCA5O60264 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.35■□□□□ 0.85
SMARCA5O60264 AL596087.1-201ENST00000400979 1969 ntBASIC20.35■□□□□ 0.85
SMARCA5O60264 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.35■□□□□ 0.85
SMARCA5O60264 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SMARCA5O60264 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
SMARCA5O60264 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMARCA5O60264 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMARCA5O60264 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SMARCA5O60264 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCA5O60264 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SMARCA5O60264 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCA5O60264 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCA5O60264 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCA5O60264 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCA5O60264 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SMARCA5O60264 AC004832.2-201ENST00000426397 482 ntBASIC20.34■□□□□ 0.85
SMARCA5O60264 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCA5O60264 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SMARCA5O60264 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCA5O60264 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
SMARCA5O60264 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMARCA5O60264 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SMARCA5O60264 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMARCA5O60264 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMARCA5O60264 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.34■□□□□ 0.85
SMARCA5O60264 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
SMARCA5O60264 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.34■□□□□ 0.85
SMARCA5O60264 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMARCA5O60264 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.33■□□□□ 0.85
SMARCA5O60264 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms