Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH7O60245 AL513480.1-201ENST00000451731 511 ntBASIC15.82■□□□□ 0.12
PCDH7O60245 POU5F1P6-201ENST00000466990 990 ntBASIC15.82■□□□□ 0.12
PCDH7O60245 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH7O60245 RNA5SP415-201ENST00000517246 115 ntBASIC15.82■□□□□ 0.12
PCDH7O60245 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH7O60245 AC020765.3-201ENST00000613051 740 ntBASIC15.82■□□□□ 0.12
PCDH7O60245 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH7O60245 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDH7O60245 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH7O60245 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH7O60245 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
PCDH7O60245 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH7O60245 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDH7O60245 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDH7O60245 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDH7O60245 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDH7O60245 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDH7O60245 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 CRYGEP-201ENST00000412192 528 ntBASIC15.81■□□□□ 0.12
PCDH7O60245 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
PCDH7O60245 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 TPM4P1-201ENST00000436100 807 ntBASIC15.81■□□□□ 0.12
PCDH7O60245 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCDH7O60245 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDH7O60245 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDH7O60245 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCDH7O60245 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDH7O60245 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDH7O60245 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDH7O60245 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDH7O60245 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDH7O60245 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDH7O60245 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDH7O60245 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDH7O60245 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH7O60245 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDH7O60245 AC006449.6-201ENST00000612330 2296 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDH7O60245 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDH7O60245 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDH7O60245 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 RNU1-129P-201ENST00000384064 167 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 HMGA1P7-201ENST00000406908 502 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 IGLL3P-201ENST00000412472 434 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PCDH7O60245 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 AC009078.2-202ENST00000463353 338 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 IGHV3-22-201ENST00000520721 359 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PCDH7O60245 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDH7O60245 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 U1.21-201ENST00000580816 167 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 AL031055.1-201ENST00000606362 631 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 AL645728.2-201ENST00000641974 660 ntBASIC15.8■□□□□ 0.12
PCDH7O60245 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PCDH7O60245 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDH7O60245 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDH7O60245 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms