Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 NFIC-211ENST00000641145 8399 ntBASIC15.71■□□□□ 0.11
PROM1O43490 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.71■□□□□ 0.11
PROM1O43490 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PROM1O43490 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.71■□□□□ 0.11
PROM1O43490 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.71■□□□□ 0.11
PROM1O43490 MIR940-201ENST00000401276 94 ntBASIC15.71■□□□□ 0.11
PROM1O43490 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.71■□□□□ 0.11
PROM1O43490 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.71■□□□□ 0.11
PROM1O43490 AC140658.5-201ENST00000438532 169 ntBASIC15.71■□□□□ 0.11
PROM1O43490 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.71■□□□□ 0.11
PROM1O43490 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.71■□□□□ 0.11
PROM1O43490 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.71■□□□□ 0.11
PROM1O43490 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.71■□□□□ 0.11
PROM1O43490 AL513190.1-201ENST00000621254 727 ntBASIC15.71■□□□□ 0.11
PROM1O43490 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PROM1O43490 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PROM1O43490 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.71■□□□□ 0.11
PROM1O43490 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
PROM1O43490 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PROM1O43490 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.1
PROM1O43490 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PROM1O43490 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PROM1O43490 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
PROM1O43490 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.7■□□□□ 0.1
PROM1O43490 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PROM1O43490 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.7■□□□□ 0.1
PROM1O43490 AC092474.2-201ENST00000424288 719 ntBASIC15.7■□□□□ 0.1
PROM1O43490 AC109635.5-201ENST00000533593 962 ntBASIC15.7■□□□□ 0.1
PROM1O43490 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.7■□□□□ 0.1
PROM1O43490 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.7■□□□□ 0.1
PROM1O43490 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.7■□□□□ 0.1
PROM1O43490 AL009183.1-201ENST00000603760 355 ntBASIC15.7■□□□□ 0.1
PROM1O43490 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PROM1O43490 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PROM1O43490 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PROM1O43490 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.7■□□□□ 0.1
PROM1O43490 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PROM1O43490 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.69■□□□□ 0.1
PROM1O43490 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
PROM1O43490 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PROM1O43490 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.69■□□□□ 0.1
PROM1O43490 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.69■□□□□ 0.1
PROM1O43490 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.69■□□□□ 0.1
PROM1O43490 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.69■□□□□ 0.1
PROM1O43490 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PROM1O43490 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms