Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN3O15551 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN3O15551 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
CLDN3O15551 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN3O15551 AC079328.2-201ENST00000561241 3354 ntBASIC18.04■□□□□ 0.48
CLDN3O15551 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN3O15551 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN3O15551 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
CLDN3O15551 UXT-AS1-201ENST00000590504 1525 ntBASIC18.03■□□□□ 0.48
CLDN3O15551 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CLDN3O15551 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN3O15551 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN3O15551 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN3O15551 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN3O15551 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN3O15551 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN3O15551 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN3O15551 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN3O15551 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN3O15551 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN3O15551 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CLDN3O15551 AC023141.5-201ENST00000458585 616 ntBASIC18.03■□□□□ 0.48
CLDN3O15551 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN3O15551 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.03■□□□□ 0.48
CLDN3O15551 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.03■□□□□ 0.48
CLDN3O15551 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN3O15551 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN3O15551 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN3O15551 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
CLDN3O15551 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN3O15551 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN3O15551 GGT3P-204ENST00000453783 1664 ntBASIC18.03■□□□□ 0.48
CLDN3O15551 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN3O15551 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLDN3O15551 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.02■□□□□ 0.48
CLDN3O15551 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN3O15551 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 AC073439.1-201ENST00000624121 1774 ntBASIC18.02■□□□□ 0.48
CLDN3O15551 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN3O15551 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN3O15551 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN3O15551 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN3O15551 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLDN3O15551 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN3O15551 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN3O15551 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN3O15551 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 PRYP6-201ENST00000514804 343 ntBASIC18.02■□□□□ 0.48
CLDN3O15551 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN3O15551 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN3O15551 PCGF3-213ENST00000620529 1899 ntBASIC18.02■□□□□ 0.48
CLDN3O15551 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CLDN3O15551 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
CLDN3O15551 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN3O15551 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN3O15551 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN3O15551 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.02■□□□□ 0.47
CLDN3O15551 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDN3O15551 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN3O15551 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDN3O15551 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
CLDN3O15551 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLDN3O15551 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.01■□□□□ 0.47
CLDN3O15551 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN3O15551 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDN3O15551 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLDN3O15551 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN3O15551 MIR346-201ENST00000362234 95 ntBASIC18.01■□□□□ 0.47
CLDN3O15551 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN3O15551 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN3O15551 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.01■□□□□ 0.47
CLDN3O15551 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CLDN3O15551 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLDN3O15551 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms