Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXN1O15353 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXN1O15353 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXN1O15353 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXN1O15353 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.66■□□□□ 0.74
FOXN1O15353 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXN1O15353 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.66■□□□□ 0.74
FOXN1O15353 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXN1O15353 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 AC135586.1-201ENST00000539323 574 ntBASIC19.66■□□□□ 0.74
FOXN1O15353 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.66■□□□□ 0.74
FOXN1O15353 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
FOXN1O15353 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXN1O15353 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXN1O15353 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXN1O15353 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXN1O15353 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 AC092053.1-201ENST00000605787 1936 ntBASIC19.65■□□□□ 0.74
FOXN1O15353 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXN1O15353 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXN1O15353 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.65■□□□□ 0.74
FOXN1O15353 HMGA1P7-201ENST00000406908 502 ntBASIC19.65■□□□□ 0.74
FOXN1O15353 ACTG1P4-201ENST00000425123 1122 ntBASIC19.65■□□□□ 0.74
FOXN1O15353 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXN1O15353 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
FOXN1O15353 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXN1O15353 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
FOXN1O15353 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXN1O15353 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.65■□□□□ 0.74
FOXN1O15353 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXN1O15353 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
FOXN1O15353 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 AC016396.2-201ENST00000562575 1417 ntBASIC19.65■□□□□ 0.74
FOXN1O15353 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
FOXN1O15353 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FOXN1O15353 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN1O15353 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXN1O15353 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FOXN1O15353 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FOXN1O15353 AGGF1P2-201ENST00000426656 2106 ntBASIC19.64■□□□□ 0.74
FOXN1O15353 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FOXN1O15353 AC124067.4-201ENST00000519691 2379 ntBASIC19.64■□□□□ 0.74
FOXN1O15353 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
FOXN1O15353 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
FOXN1O15353 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXN1O15353 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
FOXN1O15353 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN1O15353 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
FOXN1O15353 BRWD1P1-201ENST00000401091 371 ntBASIC19.64■□□□□ 0.73
FOXN1O15353 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
FOXN1O15353 AC002558.1-201ENST00000488906 803 ntBASIC19.64■□□□□ 0.73
FOXN1O15353 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN1O15353 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.64■□□□□ 0.73
FOXN1O15353 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN1O15353 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.64■□□□□ 0.73
FOXN1O15353 TEX28P1-201ENST00000613479 1221 ntBASIC19.64■□□□□ 0.73
FOXN1O15353 AC007967.4-201ENST00000614700 386 ntBASIC19.64■□□□□ 0.73
FOXN1O15353 TEX28P2-201ENST00000617764 1221 ntBASIC19.64■□□□□ 0.73
FOXN1O15353 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXN1O15353 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
FOXN1O15353 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.64■□□□□ 0.73
FOXN1O15353 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN1O15353 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FOXN1O15353 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXN1O15353 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN1O15353 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
FOXN1O15353 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXN1O15353 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
FOXN1O15353 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXN1O15353 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.63■□□□□ 0.73
FOXN1O15353 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
FOXN1O15353 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
FOXN1O15353 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN1O15353 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
FOXN1O15353 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms