Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC005412.3-201ENST00000580309 715 ntBASIC15.69■□□□□ 0.1
UPK1AO00322 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
UPK1AO00322 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.69■□□□□ 0.1
UPK1AO00322 AC010654.1-201ENST00000615722 808 ntBASIC15.69■□□□□ 0.1
UPK1AO00322 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.69■□□□□ 0.1
UPK1AO00322 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1AO00322 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
UPK1AO00322 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.69■□□□□ 0.1
UPK1AO00322 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.69■□□□□ 0.1
UPK1AO00322 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UPK1AO00322 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.68■□□□□ 0.1
UPK1AO00322 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK1AO00322 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1AO00322 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
UPK1AO00322 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
UPK1AO00322 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK1AO00322 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK1AO00322 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
UPK1AO00322 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK1AO00322 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
UPK1AO00322 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK1AO00322 AC009947.1-201ENST00000444350 727 ntBASIC15.68■□□□□ 0.1
UPK1AO00322 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK1AO00322 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.68■□□□□ 0.1
UPK1AO00322 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
UPK1AO00322 AL121894.2-201ENST00000602977 491 ntBASIC15.68■□□□□ 0.1
UPK1AO00322 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UPK1AO00322 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1AO00322 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1AO00322 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1AO00322 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UPK1AO00322 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.68■□□□□ 0.1
UPK1AO00322 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.68■□□□□ 0.1
UPK1AO00322 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.68■□□□□ 0.1
UPK1AO00322 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.67■□□□□ 0.1
UPK1AO00322 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UPK1AO00322 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UPK1AO00322 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 FAM185BP-201ENST00000443595 716 ntBASIC15.67■□□□□ 0.1
UPK1AO00322 RNA5SP415-201ENST00000517246 115 ntBASIC15.67■□□□□ 0.1
UPK1AO00322 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.67■□□□□ 0.1
UPK1AO00322 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.67■□□□□ 0.1
UPK1AO00322 AC087641.1-201ENST00000557561 1021 ntBASIC15.67■□□□□ 0.1
UPK1AO00322 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UPK1AO00322 MIR4751-201ENST00000578027 74 ntBASIC15.67■□□□□ 0.1
UPK1AO00322 CYP2A7P1-201ENST00000595391 815 ntBASIC15.67■□□□□ 0.1
UPK1AO00322 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.67■□□□□ 0.1
UPK1AO00322 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.67■□□□□ 0.1
UPK1AO00322 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.67■□□□□ 0.1
UPK1AO00322 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.67■□□□□ 0.1
UPK1AO00322 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
UPK1AO00322 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UPK1AO00322 KRT8P39-201ENST00000396270 1433 ntBASIC15.67■□□□□ 0.1
UPK1AO00322 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
UPK1AO00322 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms