Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 AC074386.1-202ENST00000463561 864 ntBASIC16.54■□□□□ 0.24
CFAP99D6REC4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 MIR3909-201ENST00000579518 119 ntBASIC16.54■□□□□ 0.24
CFAP99D6REC4 AL031055.1-201ENST00000606362 631 ntBASIC16.54■□□□□ 0.24
CFAP99D6REC4 AC021097.1-201ENST00000607902 574 ntBASIC16.54■□□□□ 0.24
CFAP99D6REC4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.54■□□□□ 0.24
CFAP99D6REC4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CFAP99D6REC4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 RNU1-129P-201ENST00000384064 167 ntBASIC16.53■□□□□ 0.24
CFAP99D6REC4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 PMS2P4-201ENST00000412466 1052 ntBASIC16.53■□□□□ 0.24
CFAP99D6REC4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 U1.21-201ENST00000580816 167 ntBASIC16.53■□□□□ 0.24
CFAP99D6REC4 AC068137.2-201ENST00000605408 478 ntBASIC16.53■□□□□ 0.24
CFAP99D6REC4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CFAP99D6REC4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.53■□□□□ 0.24
CFAP99D6REC4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 LINC00554-201ENST00000564841 3011 ntBASIC16.52■□□□□ 0.24
CFAP99D6REC4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 AP000347.1-202ENST00000435868 847 ntBASIC16.52■□□□□ 0.24
CFAP99D6REC4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.52■□□□□ 0.24
CFAP99D6REC4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CFAP99D6REC4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms