Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TBC1D3FA6NER0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 MIR661-201ENST00000384842 89 ntBASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 AC004890.2-204ENST00000481968 304 ntBASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 SPDYE12P-201ENST00000618416 771 ntBASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TBC1D3FA6NER0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TBC1D3FA6NER0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 RN7SL828P-201ENST00000607615 303 ntBASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 AL589739.1-201ENST00000607720 493 ntBASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TBC1D3FA6NER0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 LTB4R2-202ENST00000528054 3092 ntBASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.38■□□□□ 0.21
TBC1D3FA6NER0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms