Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 AL671277.1-201ENST00000429656 993 ntBASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC196A0A1B0GTZ2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 AL355306.1-201ENST00000415580 579 ntBASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 AC005622.1-201ENST00000636801 1703 ntBASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC196A0A1B0GTZ2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 U82695.1-201ENST00000635752 1889 ntBASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 RN7SL589P-201ENST00000481268 310 ntBASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC196A0A1B0GTZ2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC196A0A1B0GTZ2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC196A0A1B0GTZ2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC196A0A1B0GTZ2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms