Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 AL645728.1-201ENST00000366221 2101 ntBASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AC108751.1-201ENST00000490852 363 ntBASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AC005412.3-201ENST00000580309 715 ntBASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AC116407.3-201ENST00000623905 1129 ntBASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AL353732.1-201ENST00000569618 1459 ntBASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 AC006277.1-201ENST00000624348 1610 ntBASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DRB4X5D2U9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 RNF216P1-203ENST00000404404 2427 ntBASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms