Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 TFAMP1-201ENST00000412727 736 ntBASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 ADH5P3-201ENST00000433842 1137 ntBASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.71■□□□□ 0.27
RAI2Q9Y5P3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.26
RAI2Q9Y5P3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAI2Q9Y5P3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RAI2Q9Y5P3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
RAI2Q9Y5P3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAI2Q9Y5P3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 AL139400.1-201ENST00000366220 510 ntBASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 FAM86C2P-203ENST00000528684 1004 ntBASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 AC093512.1-201ENST00000617969 520 ntBASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 AKAP8P1-201ENST00000434743 1349 ntBASIC16.7■□□□□ 0.26
RAI2Q9Y5P3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 AL135744.1-201ENST00000565098 629 ntBASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.69■□□□□ 0.26
RAI2Q9Y5P3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms