Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AL513477.1-201ENST00000602865 2407 ntBASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 TREML5P-201ENST00000421694 576 ntBASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AC055876.3-201ENST00000431496 288 ntBASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AC098859.1-201ENST00000502915 1238 ntBASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 IGHV3-42-201ENST00000520410 361 ntBASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AL390955.2-201ENST00000603032 514 ntBASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 AC138649.4-201ENST00000612222 287 ntBASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00588Q9Y4M8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 FO538757.1-201ENST00000623083 1397 ntBASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 GGT4P-201ENST00000623672 1708 ntBASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms