Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SORCS3Q9UPU3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SORCS3Q9UPU3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 TP53TG3HP-202ENST00000569755 579 ntBASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 AC046158.3-201ENST00000624947 2558 ntBASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SORCS3Q9UPU3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
SORCS3Q9UPU3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SORCS3Q9UPU3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.38
SORCS3Q9UPU3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SORCS3Q9UPU3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SORCS3Q9UPU3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
SORCS3Q9UPU3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SORCS3Q9UPU3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms