Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.01■□□□□ 0.63
USP25Q9UHP3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.01■□□□□ 0.63
USP25Q9UHP3 AC091304.2-201ENST00000564639 760 ntBASIC19.01■□□□□ 0.63
USP25Q9UHP3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.01■□□□□ 0.63
USP25Q9UHP3 MTDHP4-201ENST00000600287 670 ntBASIC19.01■□□□□ 0.63
USP25Q9UHP3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.01■□□□□ 0.63
USP25Q9UHP3 REXO1L6P-202ENST00000619970 1078 ntBASIC19.01■□□□□ 0.63
USP25Q9UHP3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
USP25Q9UHP3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.01■□□□□ 0.63
USP25Q9UHP3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.01■□□□□ 0.63
USP25Q9UHP3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP25Q9UHP3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP25Q9UHP3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19■□□□□ 0.63
USP25Q9UHP3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19■□□□□ 0.63
USP25Q9UHP3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
USP25Q9UHP3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19■□□□□ 0.63
USP25Q9UHP3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
USP25Q9UHP3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
USP25Q9UHP3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19■□□□□ 0.63
USP25Q9UHP3 SART3-203ENST00000546611 1184 ntBASIC19■□□□□ 0.63
USP25Q9UHP3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19■□□□□ 0.63
USP25Q9UHP3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19■□□□□ 0.63
USP25Q9UHP3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19■□□□□ 0.63
USP25Q9UHP3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
USP25Q9UHP3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19■□□□□ 0.63
USP25Q9UHP3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19■□□□□ 0.63
USP25Q9UHP3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19■□□□□ 0.63
USP25Q9UHP3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19■□□□□ 0.63
USP25Q9UHP3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19■□□□□ 0.63
USP25Q9UHP3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
USP25Q9UHP3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP25Q9UHP3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP25Q9UHP3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.99■□□□□ 0.63
USP25Q9UHP3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms