Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 AC025181.2-201ENST00000606994 802 ntBASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RIMBP3Q9UFD9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 KRT18P64-201ENST00000434946 1219 ntBASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 RNF146-211ENST00000609447 607 ntTSL 4 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 ZBTB45P2-201ENST00000452245 1531 ntBASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC25.58■■□□□ 1.69
RIMBP3Q9UFD9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
RIMBP3Q9UFD9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
RIMBP3Q9UFD9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC25.58■■□□□ 1.68
RIMBP3Q9UFD9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 HNRNPA1P63-201ENST00000427917 963 ntBASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 EIF5AP2-201ENST00000585668 1047 ntBASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 AC087045.2-201ENST00000606279 1003 ntBASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC25.57■■□□□ 1.68
RIMBP3Q9UFD9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 TARDBPP1-201ENST00000442013 1203 ntBASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
RIMBP3Q9UFD9 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 AL805961.1-201ENST00000642026 753 ntBASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 AC026316.1-201ENST00000398900 414 ntBASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 AC012618.1-201ENST00000461223 412 ntBASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RIMBP3Q9UFD9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 ACKR1-201ENST00000368121 1240 ntBASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 AC013355.1-201ENST00000562625 723 ntBASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 CENPX-208ENST00000584347 799 ntTSL 2 BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 ECM1P1-201ENST00000604092 1279 ntBASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RIMBP3Q9UFD9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms