Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.33■□□□□ 0.2
MKS1Q9NXB0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 AC020658.6-201ENST00000623564 1870 ntBASIC16.33■□□□□ 0.2
MKS1Q9NXB0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MKS1Q9NXB0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 MTDHP4-201ENST00000600287 670 ntBASIC16.32■□□□□ 0.2
MKS1Q9NXB0 AC138894.3-201ENST00000603787 634 ntBASIC16.32■□□□□ 0.2
MKS1Q9NXB0 AC069148.1-201ENST00000608741 768 ntBASIC16.32■□□□□ 0.2
MKS1Q9NXB0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.32■□□□□ 0.2
MKS1Q9NXB0 AC023157.3-201ENST00000619086 2088 ntBASIC16.32■□□□□ 0.2
MKS1Q9NXB0 AL355877.3-201ENST00000622820 899 ntBASIC16.32■□□□□ 0.2
MKS1Q9NXB0 AP000550.4-202ENST00000639755 178 ntBASIC16.32■□□□□ 0.2
MKS1Q9NXB0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MKS1Q9NXB0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 AC006504.4-201ENST00000592118 1568 ntBASIC16.31■□□□□ 0.2
MKS1Q9NXB0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 AL160237.2-201ENST00000556165 472 ntBASIC16.31■□□□□ 0.2
MKS1Q9NXB0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 SSR4P1-203ENST00000599569 2260 ntBASIC16.31■□□□□ 0.2
MKS1Q9NXB0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 U82695.1-201ENST00000635752 1889 ntBASIC16.31■□□□□ 0.2
MKS1Q9NXB0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MKS1Q9NXB0 TMBIM7P-203ENST00000641617 1718 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms