Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 NORAD-201ENST00000565493 5339 ntBASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 PI4KAP1-204ENST00000612579 1703 ntBASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AC103702.1-201ENST00000548801 2630 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AC104640.1-201ENST00000562617 2109 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AC068587.6-202ENST00000641839 5619 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 CYP2A7P1-201ENST00000595391 815 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AC010654.1-201ENST00000615722 808 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AP001350.2-201ENST00000625104 1094 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AC092384.3-202ENST00000564646 2873 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AL353732.1-201ENST00000569618 1459 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 AP005117.1-202ENST00000581724 1908 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 FLJ16779-201ENST00000612722 7638 ntBASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.42□□□□□ -0.58
CDC42SE2Q9NRR3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 PTCHD3P3-201ENST00000403073 906 ntBASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.41□□□□□ -0.58
CDC42SE2Q9NRR3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms