Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.67■□□□□ 0.1
FAM60AQ9NP50 ALOX12P2-203ENST00000570921 1945 ntBASIC15.66■□□□□ 0.1
FAM60AQ9NP50 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 MIR943-201ENST00000401286 94 ntBASIC15.66■□□□□ 0.1
FAM60AQ9NP50 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 RNA5SP410-201ENST00000516285 106 ntBASIC15.66■□□□□ 0.1
FAM60AQ9NP50 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.66■□□□□ 0.1
FAM60AQ9NP50 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.66■□□□□ 0.1
FAM60AQ9NP50 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 AC079328.2-201ENST00000561241 3354 ntBASIC15.65■□□□□ 0.1
FAM60AQ9NP50 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 TREML5P-201ENST00000421694 576 ntBASIC15.65■□□□□ 0.1
FAM60AQ9NP50 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 AC140878.1-201ENST00000565277 250 ntBASIC15.65■□□□□ 0.1
FAM60AQ9NP50 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.65■□□□□ 0.1
FAM60AQ9NP50 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FAM60AQ9NP50 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
FAM60AQ9NP50 FO538757.1-201ENST00000623083 1397 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms