Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 AC012569.1-201ENST00000591191 1524 ntBASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 HNRNPDP1-201ENST00000439535 754 ntBASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 PRSS29P-201ENST00000440800 595 ntBASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 FAM215A-202ENST00000632077 792 ntBASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NEUROD4Q9HD90 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
NEUROD4Q9HD90 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
NEUROD4Q9HD90 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 AL031284.1-201ENST00000419297 478 ntBASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 AC012640.2-201ENST00000561606 901 ntBASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NEUROD4Q9HD90 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms