Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 KRT8P39-201ENST00000396270 1433 ntBASIC14.49□□□□□ -0.09
CDH20Q9HBT6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 RNU1-129P-201ENST00000384064 167 ntBASIC14.49□□□□□ -0.09
CDH20Q9HBT6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 DNAJB3-201ENST00000446806 729 ntBASIC14.49□□□□□ -0.09
CDH20Q9HBT6 HLA-J-202ENST00000469281 1241 ntBASIC14.49□□□□□ -0.09
CDH20Q9HBT6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 U1.21-201ENST00000580816 167 ntBASIC14.49□□□□□ -0.09
CDH20Q9HBT6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 AC078925.2-201ENST00000624013 1973 ntBASIC14.49□□□□□ -0.09
CDH20Q9HBT6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDH20Q9HBT6 AL596257.1-201ENST00000641463 2694 ntBASIC14.49□□□□□ -0.09
CDH20Q9HBT6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 AC002056.1-201ENST00000395613 760 ntBASIC14.48□□□□□ -0.09
CDH20Q9HBT6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 AC004832.2-201ENST00000426397 482 ntBASIC14.48□□□□□ -0.09
CDH20Q9HBT6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 AC112191.1-201ENST00000523689 701 ntBASIC14.48□□□□□ -0.09
CDH20Q9HBT6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH20Q9HBT6 MTDHP5-201ENST00000598980 586 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms