Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AC034105.1-201ENST00000563488 319 ntBASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 Z83851.2-201ENST00000609564 659 ntBASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 AP002414.3-201ENST00000589352 1468 ntBASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXP3Q9BZS1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 BX005266.1-201ENST00000473402 457 ntBASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 PGAM5P1-201ENST00000518923 814 ntBASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 AL671710.1-201ENST00000610245 2349 ntBASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 LINC01144-201ENST00000626198 1710 ntBASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXP3Q9BZS1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 AL031731.1-201ENST00000642131 2094 ntBASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 AC105339.3-201ENST00000560043 636 ntBASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 MPDU1-223ENST00000582151 728 ntBASIC17.09■□□□□ 0.33
FOXP3Q9BZS1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms