Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.83□□□□□ -0.2
SSBP3Q9BWW4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 CICP6-201ENST00000457191 2729 ntBASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 AC016027.1-202ENST00000607927 1699 ntBASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP3Q9BWW4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 AL391256.1-201ENST00000443260 1855 ntBASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 AL627223.1-201ENST00000416693 442 ntBASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 KRT18P34-201ENST00000488218 1270 ntBASIC13.81□□□□□ -0.2
SSBP3Q9BWW4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms