Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 SIGLEC16-201ENST00000599858 1437 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 GOLGA8DP-202ENST00000341390 2184 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 BET1L-202ENST00000332865 533 ntTSL 5 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 SPDYE21P-201ENST00000413323 827 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 RBM17P3-201ENST00000417687 1192 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 UPK3BP1-201ENST00000428678 509 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 HCG4P8-203ENST00000443049 980 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 SCARNA2-201ENST00000458748 420 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 MSRA-206ENST00000521209 814 ntTSL 3 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 PRELID1P1-202ENST00000567272 903 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 AL445228.2-201ENST00000605589 952 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 NPAP1P7-201ENST00000613027 823 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ABBA01031661.1-201ENST00000634362 1253 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 AC067750.1-201ENST00000608826 6545 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 MIR193BHG-211ENST00000641433 5365 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 AL122018.1-201ENST00000446607 2310 ntBASIC9.93□□□□□ -0.82
LIMD2Q9BT23 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LIMD2Q9BT23 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 NCF1C-201ENST00000438382 1427 ntBASIC9.92□□□□□ -0.82
LIMD2Q9BT23 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 AC091607.1-201ENST00000490318 1060 ntBASIC9.92□□□□□ -0.82
LIMD2Q9BT23 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms