Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 TSPY26P-202ENST00000565928 3884 ntBASIC16.94■□□□□ 0.3
TRIM56Q9BRZ2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM56Q9BRZ2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 MIR4492-201ENST00000581627 80 ntBASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 MPDU1-223ENST00000582151 728 ntBASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 AL031731.1-201ENST00000642131 2094 ntBASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 GGT4P-201ENST00000623672 1708 ntBASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM56Q9BRZ2 AL513523.2-202ENST00000427283 2040 ntBASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 GGT3P-204ENST00000453783 1664 ntBASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 FDX1P1-201ENST00000449115 551 ntBASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 AC107918.2-201ENST00000530817 355 ntBASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM56Q9BRZ2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms