Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MTRQ99707 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
MTRQ99707 RPS8P6-201ENST00000426177 609 ntBASIC18.62■□□□□ 0.57
MTRQ99707 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.62■□□□□ 0.57
MTRQ99707 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.62■□□□□ 0.57
MTRQ99707 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.62■□□□□ 0.57
MTRQ99707 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.62■□□□□ 0.57
MTRQ99707 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.62■□□□□ 0.57
MTRQ99707 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.62■□□□□ 0.57
MTRQ99707 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.62■□□□□ 0.57
MTRQ99707 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.62■□□□□ 0.57
MTRQ99707 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.62■□□□□ 0.57
MTRQ99707 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MTRQ99707 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MTRQ99707 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
MTRQ99707 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MTRQ99707 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MTRQ99707 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MTRQ99707 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 MTHFR-217ENST00000641820 1569 ntBASIC18.61■□□□□ 0.57
MTRQ99707 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.61■□□□□ 0.57
MTRQ99707 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MTRQ99707 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.61■□□□□ 0.57
MTRQ99707 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.61■□□□□ 0.57
MTRQ99707 AP006288.1-201ENST00000446065 395 ntBASIC18.61■□□□□ 0.57
MTRQ99707 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.61■□□□□ 0.57
MTRQ99707 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MTRQ99707 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.61■□□□□ 0.57
MTRQ99707 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.61■□□□□ 0.57
MTRQ99707 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.61■□□□□ 0.57
MTRQ99707 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
MTRQ99707 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
MTRQ99707 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC18.61■□□□□ 0.57
MTRQ99707 AC079781.4-201ENST00000641908 219 ntBASIC18.61■□□□□ 0.57
MTRQ99707 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.61■□□□□ 0.57
MTRQ99707 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.61■□□□□ 0.57
MTRQ99707 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
MTRQ99707 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MTRQ99707 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
MTRQ99707 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.6■□□□□ 0.57
MTRQ99707 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.6■□□□□ 0.57
MTRQ99707 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 RNU1-129P-201ENST00000384064 167 ntBASIC18.6■□□□□ 0.57
MTRQ99707 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.6■□□□□ 0.57
MTRQ99707 U1.21-201ENST00000580816 167 ntBASIC18.6■□□□□ 0.57
MTRQ99707 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.6■□□□□ 0.57
MTRQ99707 AL009183.1-201ENST00000603760 355 ntBASIC18.6■□□□□ 0.57
MTRQ99707 AL031055.1-201ENST00000606362 631 ntBASIC18.6■□□□□ 0.57
MTRQ99707 AC099522.2-201ENST00000607001 744 ntBASIC18.6■□□□□ 0.57
MTRQ99707 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.6■□□□□ 0.57
MTRQ99707 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
MTRQ99707 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.6■□□□□ 0.57
MTRQ99707 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MTRQ99707 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.6■□□□□ 0.57
MTRQ99707 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms