Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.5■□□□□ 0.39
RAD9AQ99638 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.5■□□□□ 0.39
RAD9AQ99638 BNIP3P42-201ENST00000454982 569 ntBASIC17.5■□□□□ 0.39
RAD9AQ99638 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD9AQ99638 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAD9AQ99638 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.5■□□□□ 0.39
RAD9AQ99638 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.5■□□□□ 0.39
RAD9AQ99638 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.5■□□□□ 0.39
RAD9AQ99638 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.5■□□□□ 0.39
RAD9AQ99638 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.5■□□□□ 0.39
RAD9AQ99638 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD9AQ99638 BNIP3P29-201ENST00000598302 571 ntBASIC17.5■□□□□ 0.39
RAD9AQ99638 AC074044.1-201ENST00000609673 707 ntBASIC17.5■□□□□ 0.39
RAD9AQ99638 AC011447.5-201ENST00000616168 564 ntBASIC17.5■□□□□ 0.39
RAD9AQ99638 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD9AQ99638 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD9AQ99638 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.5■□□□□ 0.39
RAD9AQ99638 AL133338.1-201ENST00000565695 1517 ntBASIC17.5■□□□□ 0.39
RAD9AQ99638 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAD9AQ99638 CDC14C-201ENST00000428251 1719 ntBASIC17.5■□□□□ 0.39
RAD9AQ99638 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.5■□□□□ 0.39
RAD9AQ99638 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD9AQ99638 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAD9AQ99638 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAD9AQ99638 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD9AQ99638 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.49■□□□□ 0.39
RAD9AQ99638 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAD9AQ99638 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.49■□□□□ 0.39
RAD9AQ99638 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 RARRES2P5-201ENST00000564013 466 ntBASIC17.49■□□□□ 0.39
RAD9AQ99638 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.49■□□□□ 0.39
RAD9AQ99638 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.49■□□□□ 0.39
RAD9AQ99638 MIR4538-201ENST00000581377 78 ntBASIC17.49■□□□□ 0.39
RAD9AQ99638 AL139011.1-202ENST00000642063 584 ntBASIC17.49■□□□□ 0.39
RAD9AQ99638 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD9AQ99638 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAD9AQ99638 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.49■□□□□ 0.39
RAD9AQ99638 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RAD9AQ99638 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD9AQ99638 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD9AQ99638 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.48■□□□□ 0.39
RAD9AQ99638 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
RAD9AQ99638 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.48■□□□□ 0.39
RAD9AQ99638 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAD9AQ99638 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.48■□□□□ 0.39
RAD9AQ99638 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 ANKRD19P-201ENST00000338192 862 ntBASIC17.48■□□□□ 0.39
RAD9AQ99638 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RAD9AQ99638 ACTBP11-201ENST00000436287 1126 ntBASIC17.48■□□□□ 0.39
RAD9AQ99638 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.48■□□□□ 0.39
RAD9AQ99638 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.48■□□□□ 0.39
RAD9AQ99638 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 AC010319.3-201ENST00000597028 470 ntBASIC17.48■□□□□ 0.39
RAD9AQ99638 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RAD9AQ99638 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD9AQ99638 CLK3P2-201ENST00000427566 1453 ntBASIC17.48■□□□□ 0.39
RAD9AQ99638 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RAD9AQ99638 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.48■□□□□ 0.39
RAD9AQ99638 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
RAD9AQ99638 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms