Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDNQ99608 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NDNQ99608 AF186996.4-201ENST00000467186 377 ntBASIC16.65■□□□□ 0.26
NDNQ99608 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.65■□□□□ 0.26
NDNQ99608 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.65■□□□□ 0.26
NDNQ99608 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.65■□□□□ 0.26
NDNQ99608 RN7SL510P-201ENST00000581311 263 ntBASIC16.65■□□□□ 0.26
NDNQ99608 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.65■□□□□ 0.26
NDNQ99608 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDNQ99608 AL356488.2-201ENST00000602755 427 ntBASIC16.65■□□□□ 0.26
NDNQ99608 MIR1199-201ENST00000621445 119 ntBASIC16.65■□□□□ 0.26
NDNQ99608 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDNQ99608 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.65■□□□□ 0.26
NDNQ99608 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.65■□□□□ 0.26
NDNQ99608 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDNQ99608 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.65■□□□□ 0.26
NDNQ99608 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDNQ99608 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDNQ99608 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.65■□□□□ 0.26
NDNQ99608 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDNQ99608 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.65■□□□□ 0.26
NDNQ99608 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NDNQ99608 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.65■□□□□ 0.26
NDNQ99608 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
NDNQ99608 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
NDNQ99608 AC024909.3-201ENST00000611513 2257 ntBASIC16.65■□□□□ 0.26
NDNQ99608 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
NDNQ99608 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
NDNQ99608 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
NDNQ99608 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NDNQ99608 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NDNQ99608 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NDNQ99608 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NDNQ99608 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NDNQ99608 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.64■□□□□ 0.25
NDNQ99608 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NDNQ99608 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.64■□□□□ 0.25
NDNQ99608 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.64■□□□□ 0.25
NDNQ99608 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
NDNQ99608 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.64■□□□□ 0.25
NDNQ99608 KRT18P67-201ENST00000432816 1264 ntBASIC16.64■□□□□ 0.25
NDNQ99608 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.64■□□□□ 0.25
NDNQ99608 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.64■□□□□ 0.25
NDNQ99608 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.64■□□□□ 0.25
NDNQ99608 AC105339.3-201ENST00000560043 636 ntBASIC16.64■□□□□ 0.25
NDNQ99608 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.64■□□□□ 0.25
NDNQ99608 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.64■□□□□ 0.25
NDNQ99608 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.64■□□□□ 0.25
NDNQ99608 AC008667.4-201ENST00000607370 168 ntBASIC16.64■□□□□ 0.25
NDNQ99608 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.64■□□□□ 0.25
NDNQ99608 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NDNQ99608 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NDNQ99608 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NDNQ99608 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NDNQ99608 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NDNQ99608 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.63■□□□□ 0.25
NDNQ99608 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.63■□□□□ 0.25
NDNQ99608 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NDNQ99608 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NDNQ99608 AL031731.1-201ENST00000642131 2094 ntBASIC16.63■□□□□ 0.25
NDNQ99608 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NDNQ99608 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 GGT3P-204ENST00000453783 1664 ntBASIC16.63■□□□□ 0.25
NDNQ99608 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.63■□□□□ 0.25
NDNQ99608 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
NDNQ99608 IGHV3-65-201ENST00000523210 341 ntBASIC16.63■□□□□ 0.25
NDNQ99608 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.63■□□□□ 0.25
NDNQ99608 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.63■□□□□ 0.25
NDNQ99608 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.63■□□□□ 0.25
NDNQ99608 AC091167.2-201ENST00000579581 588 ntBASIC16.63■□□□□ 0.25
NDNQ99608 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.63■□□□□ 0.25
NDNQ99608 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.63■□□□□ 0.25
NDNQ99608 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 DBET-201ENST00000630918 3363 ntBASIC16.63■□□□□ 0.25
NDNQ99608 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NDNQ99608 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms