Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 POU5F1P6-201ENST00000466990 990 ntBASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 AC009053.2-201ENST00000563701 2365 ntBASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 FOXO1B-201ENST00000504678 1527 ntBASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 AL353705.2-201ENST00000428243 662 ntBASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 AC125807.1-201ENST00000483097 614 ntBASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 AC051619.7-201ENST00000568314 623 ntBASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 AL355385.1-201ENST00000606123 409 ntBASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP1Q96SZ6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 AC124067.4-201ENST00000519691 2379 ntBASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 AL589702.1-201ENST00000641229 1509 ntBASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 U82695.1-201ENST00000635752 1889 ntBASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.09■□□□□ 0.33
CDK5RAP1Q96SZ6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms