Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 AL513480.1-201ENST00000451731 511 ntBASIC15.72■□□□□ 0.11
BBS4Q96RK4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 AC079776.4-201ENST00000511039 504 ntBASIC15.72■□□□□ 0.11
BBS4Q96RK4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.72■□□□□ 0.11
BBS4Q96RK4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BBS4Q96RK4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 ME2P1-201ENST00000426028 1970 ntBASIC15.71■□□□□ 0.11
BBS4Q96RK4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 IGHV3-22-201ENST00000520721 359 ntBASIC15.71■□□□□ 0.11
BBS4Q96RK4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 MIR4515-201ENST00000584082 81 ntBASIC15.71■□□□□ 0.11
BBS4Q96RK4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.71■□□□□ 0.11
BBS4Q96RK4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BBS4Q96RK4 AC005052.1-201ENST00000625181 2492 ntBASIC15.71■□□□□ 0.1
BBS4Q96RK4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.71■□□□□ 0.1
BBS4Q96RK4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
BBS4Q96RK4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
BBS4Q96RK4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
BBS4Q96RK4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
BBS4Q96RK4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
BBS4Q96RK4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 PCDH8P1-201ENST00000428983 2773 ntBASIC15.7■□□□□ 0.1
BBS4Q96RK4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 GGT4P-201ENST00000623672 1708 ntBASIC15.7■□□□□ 0.1
BBS4Q96RK4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms