Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 PCGF3-213ENST00000620529 1899 ntBASIC17.03■□□□□ 0.32
RPRD1AQ96P16 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPRD1AQ96P16 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 GGT3P-204ENST00000453783 1664 ntBASIC17.02■□□□□ 0.32
RPRD1AQ96P16 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 AC023141.5-201ENST00000458585 616 ntBASIC17.02■□□□□ 0.32
RPRD1AQ96P16 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 AC092183.1-201ENST00000469884 875 ntBASIC17.02■□□□□ 0.32
RPRD1AQ96P16 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 PRYP6-201ENST00000514804 343 ntBASIC17.02■□□□□ 0.32
RPRD1AQ96P16 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 KRT8P23-201ENST00000560090 1207 ntBASIC17.02■□□□□ 0.32
RPRD1AQ96P16 AC093520.2-201ENST00000561830 333 ntBASIC17.02■□□□□ 0.32
RPRD1AQ96P16 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 LINC01225-203ENST00000563550 1244 ntBASIC17.02■□□□□ 0.32
RPRD1AQ96P16 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.02■□□□□ 0.32
RPRD1AQ96P16 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPRD1AQ96P16 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RPRD1AQ96P16 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPRD1AQ96P16 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RPRD1AQ96P16 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.02■□□□□ 0.31
RPRD1AQ96P16 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.02■□□□□ 0.31
RPRD1AQ96P16 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPRD1AQ96P16 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RPRD1AQ96P16 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.02■□□□□ 0.31
RPRD1AQ96P16 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 KRT18P32-201ENST00000424695 1287 ntBASIC17.01■□□□□ 0.31
RPRD1AQ96P16 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 AC073439.1-201ENST00000624121 1774 ntBASIC17.01■□□□□ 0.31
RPRD1AQ96P16 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPRD1AQ96P16 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms