Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 NKILA-202ENST00000614771 2598 ntBASIC13.47□□□□□ -0.25
ZNF48Q96MX3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 AC236430.1-201ENST00000402231 743 ntBASIC13.46□□□□□ -0.25
ZNF48Q96MX3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.46□□□□□ -0.25
ZNF48Q96MX3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 IGHV3-42-201ENST00000520410 361 ntBASIC13.46□□□□□ -0.25
ZNF48Q96MX3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ZNF48Q96MX3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ZNF48Q96MX3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
ZNF48Q96MX3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.46□□□□□ -0.26
ZNF48Q96MX3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.46□□□□□ -0.26
ZNF48Q96MX3 KRT8P49-201ENST00000604166 1432 ntBASIC13.46□□□□□ -0.26
ZNF48Q96MX3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
ZNF48Q96MX3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
ZNF48Q96MX3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
ZNF48Q96MX3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.46□□□□□ -0.26
ZNF48Q96MX3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.46□□□□□ -0.26
ZNF48Q96MX3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 CYP2A7P1-201ENST00000595391 815 ntBASIC13.45□□□□□ -0.26
ZNF48Q96MX3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZNF48Q96MX3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZNF48Q96MX3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms