Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.63■□□□□ 0.57
FGD4Q96M96 ZNF890P-202ENST00000530367 1156 ntBASIC18.63■□□□□ 0.57
FGD4Q96M96 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.63■□□□□ 0.57
FGD4Q96M96 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.63■□□□□ 0.57
FGD4Q96M96 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.63■□□□□ 0.57
FGD4Q96M96 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.63■□□□□ 0.57
FGD4Q96M96 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.63■□□□□ 0.57
FGD4Q96M96 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.63■□□□□ 0.57
FGD4Q96M96 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.63■□□□□ 0.57
FGD4Q96M96 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FGD4Q96M96 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FGD4Q96M96 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
FGD4Q96M96 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.63■□□□□ 0.57
FGD4Q96M96 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
FGD4Q96M96 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FGD4Q96M96 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FGD4Q96M96 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FGD4Q96M96 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.62■□□□□ 0.57
FGD4Q96M96 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FGD4Q96M96 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
FGD4Q96M96 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FGD4Q96M96 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FGD4Q96M96 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.62■□□□□ 0.57
FGD4Q96M96 HLA-J-202ENST00000469281 1241 ntBASIC18.62■□□□□ 0.57
FGD4Q96M96 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 AC010336.2-201ENST00000564226 506 ntBASIC18.62■□□□□ 0.57
FGD4Q96M96 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 AC061975.2-201ENST00000581722 295 ntBASIC18.62■□□□□ 0.57
FGD4Q96M96 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.62■□□□□ 0.57
FGD4Q96M96 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.62■□□□□ 0.57
FGD4Q96M96 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FGD4Q96M96 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FGD4Q96M96 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FGD4Q96M96 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
FGD4Q96M96 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.62■□□□□ 0.57
FGD4Q96M96 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
FGD4Q96M96 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FGD4Q96M96 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FGD4Q96M96 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.61■□□□□ 0.57
FGD4Q96M96 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FGD4Q96M96 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 GGT4P-201ENST00000623672 1708 ntBASIC18.61■□□□□ 0.57
FGD4Q96M96 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 AL589702.1-201ENST00000641229 1509 ntBASIC18.61■□□□□ 0.57
FGD4Q96M96 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
FGD4Q96M96 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.61■□□□□ 0.57
FGD4Q96M96 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.61■□□□□ 0.57
FGD4Q96M96 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.61■□□□□ 0.57
FGD4Q96M96 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.61■□□□□ 0.57
FGD4Q96M96 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.61■□□□□ 0.57
FGD4Q96M96 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
FGD4Q96M96 AL132655.2-201ENST00000596276 594 ntBASIC18.61■□□□□ 0.57
FGD4Q96M96 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.61■□□□□ 0.57
FGD4Q96M96 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.61■□□□□ 0.57
FGD4Q96M96 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.61■□□□□ 0.57
FGD4Q96M96 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 AL031731.1-201ENST00000642131 2094 ntBASIC18.61■□□□□ 0.57
FGD4Q96M96 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FGD4Q96M96 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FGD4Q96M96 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FGD4Q96M96 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms