Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 FAM220BP-201ENST00000377689 816 ntBASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 RFPL4AP1-201ENST00000530883 850 ntBASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 AC069262.1-201ENST00000539058 672 ntBASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 RARRES2P9-201ENST00000565168 469 ntBASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 AC015911.4-201ENST00000588022 1070 ntBASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 PCDHA12-202ENST00000613593 2588 ntBASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 NKILA-202ENST00000614771 2598 ntBASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 PRORSD1P-202ENST00000563365 2154 ntBASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 AP3S2-216ENST00000617003 1561 ntBASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.33■□□□□ 0.37
SMARCD1Q96GM5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 FAM86GP-201ENST00000448322 971 ntBASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 POU5F1P6-201ENST00000466990 990 ntBASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 AC027796.2-201ENST00000575326 344 ntBASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 MIR6080-201ENST00000617359 66 ntBASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.33■□□□□ 0.36
SMARCD1Q96GM5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 AC067863.1-201ENST00000494933 530 ntBASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms