Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 KRT8P49-201ENST00000604166 1432 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 STK16-203ENST00000409516 895 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 SLC16A6P1-201ENST00000413214 1059 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 BRI3BPP1-201ENST00000594224 787 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AC107373.2-201ENST00000607735 490 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 CSTP2-201ENST00000610599 398 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 MIR4754-201ENST00000582477 89 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 IL9RP3-201ENST00000442856 1674 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 MIR566-201ENST00000385187 94 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AC080013.5-201ENST00000607044 679 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 AC046185.3-201ENST00000623228 1824 ntBASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNE2Q8WXH0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 CTBP2P8-201ENST00000422584 1330 ntBASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 GDNF-207ENST00000515058 764 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNE2Q8WXH0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms