Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 MEP1AP4-201ENST00000423244 1087 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 KRT223P-202ENST00000449164 1292 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 AC119751.2-201ENST00000504529 210 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 MIR4259-201ENST00000584466 101 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 CYP2A7P1-201ENST00000595391 815 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 AC004790.1-201ENST00000612686 536 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 AC133552.6-201ENST00000613406 534 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 SPTSSB-204ENST00000617024 1292 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 AC138028.4-201ENST00000564984 1845 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 LINC00896-202ENST00000609602 2128 ntBASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNIP1Q8TAD8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 FAM86MP-201ENST00000340703 885 ntBASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 AC114501.2-201ENST00000439631 535 ntBASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNIP1Q8TAD8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms