Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 MDH2-201ENST00000315758 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 AC073439.1-201ENST00000624121 1774 ntBASIC10.17□□□□□ -0.78
SVIPQ8NHG7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 RN7SKP64-201ENST00000517206 328 ntBASIC10.17□□□□□ -0.78
SVIPQ8NHG7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 LINC02193-203ENST00000568418 2056 ntTSL 5 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 CASP7-211ENST00000621345 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 PAMR1-205ENST00000611014 2613 ntTSL 5 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC10.17□□□□□ -0.78
SVIPQ8NHG7 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 TDGF1-201ENST00000296145 2513 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 STK16-204ENST00000409638 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 AP1B1-205ENST00000415447 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 ALAS1-202ENST00000394965 2430 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 AC090114.2-201ENST00000608477 7054 ntBASIC10.16□□□□□ -0.78
SVIPQ8NHG7 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 SLC39A12-AS1-201ENST00000439319 1966 ntTSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 FAM124B-202ENST00000389874 2594 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 CD36-223ENST00000544133 1914 ntTSL 5 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 AHSG-201ENST00000273784 1553 ntAPPRIS ALT2 TSL 3 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 UQCRHL-201ENST00000483273 2180 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 ZFP36L1-204ENST00000555997 3094 ntTSL 3 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 AL035071.1-201ENST00000569087 2131 ntBASIC10.16□□□□□ -0.78
SVIPQ8NHG7 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 ST5-207ENST00000526099 2404 ntTSL 2 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 AR-208ENST00000612452 10676 ntTSL 5 BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SVIPQ8NHG7 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms