Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf42Q8N5U0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
C11orf42Q8N5U0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf42Q8N5U0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf42Q8N5U0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf42Q8N5U0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf42Q8N5U0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf42Q8N5U0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
C11orf42Q8N5U0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C11orf42Q8N5U0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.83□□□□□ -0.19
C11orf42Q8N5U0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 AC006277.1-201ENST00000624348 1610 ntBASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 AC106886.4-201ENST00000623557 2502 ntBASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 MIR940-201ENST00000401276 94 ntBASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 MIR4515-201ENST00000584082 81 ntBASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 AC013467.2-201ENST00000605472 835 ntBASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 AC004877.2-201ENST00000623941 599 ntBASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 AC092865.6-201ENST00000642101 219 ntBASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 AC131009.4-201ENST00000624048 1740 ntBASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C11orf42Q8N5U0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 AL513480.1-201ENST00000451731 511 ntBASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.82□□□□□ -0.2
C11orf42Q8N5U0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms