Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 AL589182.2-201ENST00000619332 1049 ntBASIC15.57■□□□□ 0.08
CCDC71Q8IV32 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 GPR89P-201ENST00000407924 1495 ntBASIC15.57■□□□□ 0.08
CCDC71Q8IV32 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 AC006504.4-201ENST00000592118 1568 ntBASIC15.57■□□□□ 0.08
CCDC71Q8IV32 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 AC132938.5-201ENST00000624980 1813 ntBASIC15.57■□□□□ 0.08
CCDC71Q8IV32 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 MTDHP5-201ENST00000598980 586 ntBASIC15.56■□□□□ 0.08
CCDC71Q8IV32 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.56■□□□□ 0.08
CCDC71Q8IV32 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 AC148477.5-201ENST00000625164 1645 ntBASIC15.56■□□□□ 0.08
CCDC71Q8IV32 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC71Q8IV32 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 PMS2P2-201ENST00000425039 1128 ntBASIC15.55■□□□□ 0.08
CCDC71Q8IV32 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 STK25P1-201ENST00000585406 838 ntBASIC15.55■□□□□ 0.08
CCDC71Q8IV32 AC004706.3-202ENST00000621574 984 ntBASIC15.55■□□□□ 0.08
CCDC71Q8IV32 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 AC144831.1-201ENST00000573312 2656 ntBASIC15.55■□□□□ 0.08
CCDC71Q8IV32 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC71Q8IV32 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 AL353593.2-201ENST00000602529 1483 ntBASIC15.54■□□□□ 0.08
CCDC71Q8IV32 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC71Q8IV32 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms